BioWrit Guide

โ† Back to dashboard

Quick start

  1. Sign inUse Google or an email account. Results are stored under your own user folder, so nothing is shared with other accounts.
  2. Pick output typesIn New task, choose one or more document types (Review, Research, Wiki, โ€ฆ). You can select several at once.
  3. Give it a sourceA keyword, a paper URL / PMID / DOI, or a NotebookLM notebook URL. At least one is needed for the agent to have something to read.
  4. Name the projectThe name becomes the output folder, so reuse the same name to keep related documents together.
  5. Send to ClaudeThe run starts on the server. Progress, elapsed time and an ETA appear live; finished files show up in Generated Outputs for download.

Output document types

Each type is produced by a dedicated agent. Everything except Wiki is delivered as .docx.

TypeWhat you get
ResearchAn original research article draft. If a manuscript is supplied as a source, it switches to revision mode and produces a new version with Track Changes.
ReviewA review article synthesising the literature โ€” narrative or systematic.
Editorial commentA commentary on a single paper, written as continuous prose with Vancouver references.
CriticAn AI peer-review report: a strict reviewer persona scoring logical depth, scientific merit and novelty against recent literature.
RebuttalA point-by-point response letter to reviewer comments, for submission to a journal.
EditorialAn editor's reconciliation: critic comments are weighed against the draft (accept / partial / reject) and an improved version is produced with Track Changes.
ProposalA Korean research proposal (์—ฐ๊ตฌ๊ณ„ํš์„œ). Background is generated first, then the full plan.
WikiA MkDocs markdown page built from a five-pass NotebookLM deep-research query.

Filling in the task form

Keyword or Source

Accepts a plain keyword, a paper URL, a PMID, a DOI, or a pasted citation. This is what the ingest step reads first.

NotebookLM notebook URL

Optional, but it is what makes Wiki and deep literature work possible. Set a default in Settings and it is filled in automatically for every new task.

Additional sources

Use only the provided sources keeps the agent to exactly what you supplied โ€” best when you need a tightly scoped document. Also add literature from the web lets it search for supporting references.

Figure & Table

Adds a โ‰ฅ600 dpi summary figure and a methods/summary table. The figure is saved as a standalone image next to the .docx; only its legend goes into the body text.

Continue an existing project

Select a project to add another document type to the same folder, or pick a past task to reuse its inputs.

Editorial step

Optional. Runs a draft โ†’ critique โ†’ rebuttal discussion for the configured number of rounds, then an editor reconciles both sides into a revised version.

Where results are saved

Outputs are grouped by project folder and document type, inside your own user folder:

artifact/<user>/<type>/<project>/

Everything from one project therefore stays together, and other accounts cannot read it. Download links appear in Generated Outputs & Status; completion is detected from file timestamps, so treat the download list as the authoritative check.

On a shared server the save location is fixed. When you run BioWrit on your own machine you can point it at any local folder in Settings.

If something does not work

What you seeWhat it means
Orange banner:
backend not reachable
The page loaded but the server behind it is not answering. Login and browsing still work, but nothing can be saved or generated. The server needs to be started.
Red banner:
profile not loaded
Sign-in succeeded but your profile could not be read. The banner states the reason.
Sent back to the login pageEvery action needs a signed-in account on a shared deployment. Sign in again.
Empty project or output listNormal before your first run โ€” results only appear once a run finishes.
A change you expected is missingReload with Ctrl+Shift+R. The browser may be holding an older copy of the page.
Send to Claude is disabledRuns are limited to approved accounts, with a cap on how many can run at once.
โš ๏ธ Before you submit anything

Every document here is a draft produced by an AI agent. Claims, numbers, citations and reference lists can be wrong or fabricated, and a confident tone is not evidence of accuracy.

Verify every citation against the original source and confirm all data before using any of it in a submission, a grant application or a clinical context. You remain the author, and the responsibility for what you submit is yours.